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1.) It doesn't seem you took royalty stream into consideration in your rNPV analysis. Tiered double-digit royalties would be standard and change the rNPV by a huge amount (300%-400%), especially since the probability of success in phase 3 is reasonable.
2.) I am only barely familiar with the space, but the low valuation might (and I'm just guessing here), stem from an initial indication of combination therapy. Currently, velcade is not a first line treatment (though that might change soon) and this significantly cuts down the patient population.
Since Dec when interim data showed less than stellar results, the stock has taken a pounding and is down from the $5-7 range it has been trading since 2005ish. BMS clearly struck at the right time.
Is the company undervalued? Sure, but so are 500 other small biotech/pharma companies.
with regards to your last point, i couldn't agree more - who wants to invest in smallcap biotech/pharma plays in a market like this? however, the recent HSP90 deals have set the bar much higher than what kosan received. this lends me to feel that either the science behind kosan's platform isn't great (which comparitively to 2nd generation semi-synthetic or fully synthetic inhibitors, it isn't) and the IP position is somewhat weak (which i also feel is true). moreover, this deal was initiated by talks about the epothilone platform - and clearly the installment of the licensing agreement in case of no deal demonstrates where BMS' real interests are - in the epothilone area. would've been nice to see the licensing agreement with BMS and then divest the HSP90 platform to another bidder....oh well, if you're a kosan shareholder and you get in around 1.60-170...you're laughing.
btw, i enjoy reading your blog.
Again, great comments. If you don't read it all ready, check out The In Vivo Blog. They'll probably have a commentary on this deal by tomorrow afternoon and I'm sure they won't miss the parts I did. They posts there are always incredibly insightful.